Scientific production

Publications

2020

Franco, A., Rückert, C., Blom, J. et al., 2020. High diversity of Vibrio spp. associated with different ecological niches in a marine aquaria system and description of Vibrio aquimaris sp. nov. Systematic and Applied Microbiology. Volume 43, Issue 5, September 2020, 126123.

https://doi.org/10.1016/j.syapm.2020.126123

Sánchez Núñez,D.A, Mancera Pineda, J.E, Osorio, A.F. From local-to global-scale control factors of wave attenuation in mangrove environments and the role of indirect mangrove wave attenuation.Estuarine, Coastal and Shelf Science.Volume 245, 30 October 2020, 106926.

https://doi.org/10.1016/j.ecss.2020.106926

Bustos, D., Wolff, M., Muñoz, A., Acero, A.2020. Growth parameters of the invasive lionfish (Pterois volitans) in the Colombian Caribbean. Regional Studies in Marine Science Volume 38, July 2020, 101362.

https://doi.org/10.1016/j.rsma.2020.101362

Isaza-Toro E, Giraldo A, Josephraj Selvaraj J, Olimpo Ortíz-Ferrín O. Standardization of small purse seiner fishing effort and its relation to fishing grounds in the eastern tropical sector of the Eastern Pacific Ocean. Regional Studies in Marine Science. Volume 39, September 2020, 101432.

https://doi.org/10.1016/j.rsma.2020.101432

García-Garay,J., Franco-Herera, A. & Machuca-Martinez, F. Wild microorganism and plankton decay in ballast water treatments by solar disinfection (SODIS) and advanced oxidation processes. Marine Pollution Bulletin, Volume 154, May 2020, 111060.

https://doi.org/10.1016/j.marpolbul.2020.111060

Guerra-Vargas LA, Gillis LG and Mancera-Pineda JE (2020) Stronger Together: Do Coral Reefs Enhance Seagrass Meadows “Blue Carbon” Potential? Front. Mar. Sci. 7:628.

https://doi.org/10.3389/fmars.2020.00628

Benavides-Serrato M, Contreras-Rueda YF, Barrios-Gardelis LM, et al. Isolation and characterization of 17 polymorphic microsatellite loci for a sea urchin (Echinometra lucunter: Echinometridae). Rev. Acad. Colomb. Cienc. Ex. Fis. Nat. 44(172):759-767, julio-septiembre de 2020.

https:// doi.org/10.18257/raccefyn.1113

2019

Herrón, P., Castellanos-Galindo, G. A., Stäbler, M., et al. 2019. Toward Ecosystem-Based Assessment and Management of Small-Scale and Multi-Gear Fisheries: Insights From the Tropical Eastern Pacific. Frontiers in Marine Science.

https://doi.org/10.3389/fmars.2019.00127

Barragán-Barrera D. C.; Luna-Acosta A., May-Collado, L. J., et al. 2019. Foraging habits and levels of mercury in a resident population of bottlenose dolphins (Tursiops truncatus) in Bocas del Toro Archipelago, Caribbean Sea, Panama. Marine Pollution Bulletin, 145: 343-356.

https://doi.org/10.1016/j.marpolbul.2019.04.076

Sánchez-Núñez, D.A, Bernal, G. & Mancera Pineda, J.E. 2019. The Relative Role of Mangroves on Wave Erosion Mitigation and Sediment Properties. Estuaries and Coasts.

https://doi.org/10.1007/s12237-019-00628-9

Gómez-García, Ángela & Meeßen, Christian & Scheck‐Wenderoth, Magdalena & Monsalve, Gaspar & Bott, Judith & Bernhardt, Anne & Bernal, Gladys. (2019). 3‐D Modeling of Vertical Gravity Gradients and the Delimitation of Tectonic Boundaries: The Caribbean Oceanic Domain as a Case Study. Geochemistry, Geophysics, Geosystems. 20.

10.1029/2019GC008340.

A Ramírez, J Paramo. 2019. Size structure, sex ratio, and condition factor of the pink shrimp Penaeus (Farfantepenaeus) notialis Pérez Farfante, 1967 (Decapoda: Dendrobranchiata: Penaeidae) in the Colombian Caribbean, Journal of Crustacean Biology, Volume 40, Issue 2, March 2020, Pages 172–175.

https://doi.org/10.1093/jcbiol/ruz093

Gustavo A. Castellanos-Galindo,Elisa Casella, Juan Carlos Mejía-Rentería,Alessio Rovere. 2019. Habitat mapping of remote coasts: Evaluating the usefulness of lightweight unmanned aerial vehicles for conservation and monitoring. Biological Conservation, Volume 239, November 2019, 108282.

https://doi.org/10.1016/j.biocon.2019.108282

Mejía-Rentería, Juan C; Castellanos-Galindo, Gustavo A; Osorio-Cano, Juan D; Casella, Elisa.2020. Subaerial exposure of coral reefs during spring low tides in the eastern Pacific. Bulletin of Marine Science, Volume 96, Number 1, January 2020, pp. 219-220(2).

https://doi.org/10.5343/bms.2019.0085

2018

Celis J.S., Wibberg D., Ramírez-Portilla C. et al., 2018. Binning enables efficient host genome reconstruction in cnidarian holobionts. GigaScience 7: 1-12.

https://doi.org/10.1093/gigascience/giy075

Comba González N., Ramírez Hoyos, ML., López Kleine L., Montoya Castaño D., 2018. Production of enzymes and siderophores by epiphytic bacteria isolated from the marine macroalgae Ulva lactuca. Aquatic Biology, Volume 27: 107-118.

https://doi.org/10.3354/ab0070

Franco A., Busse H-J., Schubert P. et al., 2018. Winogradskyella pocilloporae sp. nov. isolated from healthy tissue of the coral Pocillopora damicornis. International Journal of Systematic and Evolutionary Microbiology 68: 1689-1696.

https://doi.org/10.1099/ijsem.0.002731

García-Garay J., Franco-Herrera A., Machuca-Martinez F., 2018. Zooplankton sensibility and phitoplankton regrowth for ballast water treatment with advanced oxidation processes. Environmental Science and Pollution Research.

https://doi.org/10.1007/s11356-018-2308-4

Herrón, P., Mildenberger, T. K., Díaz, J. M., et al., 2018. Assessment of the stock status of small-scale and multi-gear fisheries resources in the tropical Eastern Pacific region. Regional Studies in Marine Science, Volume 24: 311-323.

https://doi.org/10.1016/j.rsma.2018.09.008

Mejía-Rentería J.C., Cantera-Kintz J.R., Castellanos-Galindo G.A., et al., 2018. A comparison of Colombian Pacific mangrove extent estimations: Implications for the conservation of a unique Neotropical tidal forest. Estuarine, Coastal and Shelf Science, Volume 212: 233-240.

https://doi.org/10.1016/j.ecss.2018.07.020

Quintanilla, E., Ramírez-Portilla, C., Adu-Oppong, B. et al. Local confinement of disease-related microbiome facilitates recovery of gorgonian sea fans from necrotic-patch disease. Sci Rep 8, 14636 (2018).

https://doi.org/10.1038/s41598-018-33007-8

2017

Quintanilla, E., Wilke, T., Ramírez-Portilla, C. et al., 2017. Taking a detour: Invasion of an octocoral into the Tropical Eastern Pacific. Biological Invasions 19: 2583.

https://doi.org/10.1007/s10530-017-1469-2

Calixto-Botia, I. & Sáchez, J., 2017. A case of modular phenotypic plasticity in the depth gradient for the gorgonian coral Antillogorgia bipinnata (Cnidaria: Octocorallia). BMC Evolutionary Biology – BMC series.

https://doi.org/10.1186/s12862-017-0900-8

Celis, J.S., Edgell, D.R., Stelbrink, B. et al., 2017. Evolutionary and biogeographical implications of degraded LAGLIDADG endonuclease functionality and group I intron occurrence in stony corals (Scleractinia) and mushroom corals (Corallimorpharia). PLoS ONE. 12(3): e0173734.

https://doi.org/10.1371/journal.pone.0173734

2016 and earlier

Celis, J.S., Wibberg, D., Winkler, A. et al., 2017. Complete mitochondrial genome of the scleractinian coral Porites rus. Mitochondrial DNA Part A. DNA Mapping, sequencing and analysis. 27(5):3695-6.

https://doi.org/10.3109/19401736.2015.1079860

Alvarez-Silva, A.O. Osorio, A.F. Winter,C.2016.Practical global salinity gradient energy potential. Renewable and Sustainable Energy Reviews. Volume 60, July 2016, Pages 1387-1395.

https://doi.org/10.1016/j.rser.2016.03.021

Oscar Alvarez-Silva, Christian Winter, and Andres F. Osorio. Salinity Gradient Energy at River Mouths. Environmental Science & Technology Letters 2014 1 (10), 410-415.

DOI:10.1021/ez500239n

Alvarez-Silva,Oscar. Osorio, Andrés F. Salinity gradient energy potential in Colombia considering site specific constraints. Renewable Energy. Volume 74, February 2015, Pages 737-748.

https://doi.org/10.1016/j.renene.2014.08.074